发表文章
Expression of mitochondria-related genes is elevated in overfeeding-induced goose fatty liver
Mitochondrion, the power house of the cell, is an important organelle involving in energy homeostasis. Change in mitochondrial mass and function may lead to metabolic disorders. Previous studies indicate that mitochondrial mass loss.
Transcriptional responses and flavor volatiles biosynthesis in methyl jasmonate-treated tea leaves
Tea (Camellia sinensis) has long been consumed worldwide for its amazing flavor and aroma. Methyl jasmonate (MeJA), which acts as an effective elicitor among the plant kingdom.
Transcriptome analysis in Cucumis sativus identifies genes involved in multicellular trichome development
The regulatory gene network of unicellular trichome development in Arabidopsis thaliana has been studied intensively,but that of multicellular remains unclear.we characterized cucumber trichomes as representative multicellular and unbranched structures.
Sequencing, assembly, annotation, and gene expression: novel insights into the hormonal control of carrot root development revealed by a high‑throughput transcriptome
Abstract: Previous studies have indicated that hormonal control is essential for plant root growth. The root of the carrot is an edible vegetable with a high nutritional value.
Growth Hormone-Regulated mRNAs and miRNAs in Chicken Hepatocytes
Abstract:Growth hormone (GH) is a key regulatory factor in animal growth, development and metabolism. Based on the expression level of the GH receptor, the chicken liver is a major target organ of GH
Transcriptomic analysis of Mandarin fish brain cells infected with infectious spleen and kidney necrosis virus with an emphasis on retinoic acid-inducible gene 1-like receptors and apoptosis Q5 pathways
Abstract:Infectious spleen and kidney necrosis virus (ISKNV) has caused significant economic losses in the cultured Mandarin fish (Siniperca chuatsi) industry.
Transcriptional Responses of Olive Flounder (Paralichthys olivaceus) to Low Temperature
Abstract:The olive flounder (Paralichthys olivaceus) is an economically important flatfish in marine aquaculture with a broad thermal tolerance ranging from 14 to 23uC. Cold-tolerant flounder that can survive during the winter season .
RNA-Seq analysis of differentially expressed genes in rice under varied nitrogen supplies
Rice (Oryza sativa), an ammonium-preferring and -tolerant grain crop, is a valuable resource for researching ammonium-uptake mechanism and understanding the molecular networks that the plant copes with ammonium variation.
Chronic Toxicological Effects of b-Diketone Antibiotics on Zebrafish (Danio rerio) Using Transcriptome Profiling of Deep Sequencing
ABSTRACT: Transcriptome analysis is important for interpreting the functional elements of the genome and revealing the molecular constituents of cells and tissues. Herein, differentially transcribed genes were identified by deep sequencing
Transcriptome profiling of pyrethroid resistant and susceptible mosquitoes in the malaria vector, Anopheles sinensis
Abstract: Anopheles sinensis is a major malaria vector in China and other Southeast Asian countries, and it is becoming increasingly resistant to the insecticides used for agriculture, net impregnation, and indoor residual spray.
Transcriptome Analysis of Blunt Snout Bream (Megalobrama amblycephala) Reveals Putative Differential Expression Genes Related to Growth and Hypoxia
Our study will not only lay a foundation for further studies on growth regulation under hypoxic conditions but also facilitate selective breeding for this important aquaculture species.
De novo assembly, transcriptome characterization, lignin accumulation, and anatomic characteristics: novel insights into lignin biosynthesis during celery leaf development
Jia XL, Wang GL, Xiong F, et al. De novo assembly, transcriptome characterization, lignin accumulation, and anatomic characteristics: novel insights into lignin biosynthesis during celery leaf development.[J]. Sci Rep, 2015, 5:8259. doi:10.1038/srep08259.
Deciphering the Venomic Transcriptome of Killer-Wasp Vespa velutina
Zhirui Liu, Shuanggang Chen, Yonghua Ji, et al. (2015) Deciphering the Venomic Transcriptome of Killer-Wasp Vespa velutina, Sci. Rep. 5, 9454; DOI:10.1038/srep09454.
De Novo Assembly of the Japanese Flounder (Paralichthys olivaceus) Spleen Transcriptome to Identify Putative Genes Involved in Immunity
Japanese flounder (Paralichthys olivaceus) is an economically important marine fish in Asia and has suffered from disease outbreaks caused by various pathogens, which requires more information for immune relevant genes on genome background.
Transcriptome Changes in Eriocheir sinensis Megalopae after Desalination Provide Insights into Osmoregulation and Stress Adaption in Larvae
Eriocheir sinensis, an extremely invasive alien crab species, has important economic value in China. It encounters different salinities during its life cycle, and at the megalopal stage it faces a turning point regarding the salinity in its environment.
The Dynamic Distribution of Porcine Microbiota across Different Ages and Gastrointestinal Tract Segments
[Wenjing Zhao, Yapeng Wang, Shuyun Liu, Jiaojiao Huang, Zhengxiao Zhai, Chuan He, Jinmei Ding, Jun Wang, Huijuan Wang, Weibing Fan, Jianguo Zhao,He Meng. The......Segments. PLos one,2015,10(2): e0117441.]
SNP discovery and genotyping using restriction-site-associated DNA sequencing in chickens
[Zhai Z, Zhao W, He C, et al. SNP discovery and genotyping using restriction‐site‐associated DNA sequencing in chickens[J]. Animal Genetics, 2014.]
An RNA sequencing transcriptome analysis of the high-temperature stressed tall fescue reveals novel insights into plant thermotolerance
[Hu T, Sun XY, Zhang XZ, Eviatar Nevo, Fu JM. An RNA Sequencing Transcriptome Analysis of the High-temperature Stressed Tall Fescue Reveals Novel Insights into Plant Thermotolerance. BMC Genomics, 2014, 15: 1147. doi:10.1186/1471-2164-15-1147.]
Comparative analysis of mitochondrial genomes between the hau cytoplasmic male sterility (CMS) line and its iso-nuclear maintainer line in Brassica juncea to reveal the origin of the CMS-associated gene orf288
[ Shuangping Heng, Chao Wei, Bing Jing, et al.Comparative analysis of mitochondrial genomes ....BMC Genomics 2014, 15:322 , doi:10.1186/1471-2164-15-322.]
RNA-Seq Analysis of Transcriptome and Glucosinolate Metabolism in Seeds and Sprouts of Broccoli (Brassica oleracea var. italic)
[Gao J, Yu X, Ma F, Li J.RNA-Seq Analysis of Transcriptome and Glucosinolate Metabolism in Seeds and Sprouts of Broccoli (Brassica oleracea var. italica). PLoS ONE,2014,9(2): e88804. doi:10.1371/journal.pone.0088804.]
Transcriptome sequencing, annotation and expression analysis of Nannochloropsis sp. at different growth phases
[Minggang Zheng,e al.Transcriptome sequencing, annotation and expression analysis of Nannochloropsis sp. at different growth phases.Gene,2013,523(2):117-121.]
High-Throughput Analysis and Characterization of Astragalus membranaceus Transcriptome Using 454 GS FLX
[ Liu X-B, Ma L, Zhang A-H, et al. (2014) High-Throughput Analysis and Characterization of Astragalus membranaceus Transcriptome Using 454 GS FLX. PLoS ONE 9(5): e95831. doi:10.1371/journal.pone.0095831]
Comprehensive analysis of Sichuan white geese (Anser cygnoides) transcriptome
[Ning Ding, et al. Comprehensive analysis of Sichuan white geese(Anser cygnoides) transcriptome, Animal Science Journal,2014,85:650–659.]
Complete genome sequence and transcription profiles of the rock bream iridovirus RBIV-C1
[Zhang BC, Zhang M, Sun BG, Fang Y, Xiao ZZ, Sun L . Complete genome sequence and transcription profiles of the rock bream iridovirus RBIV-C1. Dis Aquat Org ,2013,104:203-214]
Genome Sequence of Pseudomonas aeruginosa Strain SJTD-1, a Bacterium Capable of Degrading Long-Chain Alkanes and Crude Oil
[Huan Liu,et al. Genome Sequence of Pseudomonas aeruginosa Strain SJTD-1, a Bacterium Capable of Degrading Long-Chain Alkanes and Crude Oil, J. Bacteriol. 2012, 194(17):4783.]
Streptococcus iniae SF1: Complete Genome Sequence,Proteomic Profile, and Immunoprotective Antigens
[Zhang B-c, Zhang J, Sun L . Streptococcus iniae SF1: Complete Genome Sequence, Proteomic Profile, and Immunoprotective Antigens. PLoSONE,2014, 9(3): e91324.]
Genome Sequence of Pseudomonas putida Strain SJTE-1, a Bacterium Capable of Degrading Estrogens and Persistent Organic Pollutants
[Rubing Liang,et al. Genome Sequence of Pseudomonas putida Strain SJTE-1, a Bacterium Capable of Degrading Estrogens and Persistent Organic Pollutants,J. Bacteriol. 2012, 194(17):4781.]
Fungal pathogen accumulation at the expense of plant-beneficial fungi as a consequence of consecutive peanut monoculturing
[Xiao-gang Li, Chang-feng Ding, Tao-lin Zhang, Xing-xiang Wang.Fungal pathogen accumulation at the expense of plant-beneficial fungi as a consequence of consecutive peanut monoculturing.Soil Biology and Biochemistry, Volume 72, Issue null, Pages 11-18.]
利用高通量测序对封存 悦韵圆泄漏情景下土壤细菌的研究
[田地员,马欣,李玉娥,查良松,伍洋,邹晓霞,刘爽.利用高通量测序对封存CO2泄漏情景下土壤细菌的研究.环境科学,2013,34(10):4096-4104]
Water Stratification Affects the Microeukaryotic Community in a Subtropical Deep Reservoir
[Yu, Z., Yang, J., Zhou, J., Yu, X.Q., Liu, L.M. and Lv, H. Water stratification affects the microeukaryotic community in a subtropical deep reservoir. Journal of Eukaryotic Microbiology,2013,DOI: 10.1111/jeu.12090.]
Quantitative Genetic Background of the Host Influences Gut Microbiomes in Chickens
[Zhao, L. et al. Quantitative Genetic Background of the Host Influences GutMicrobiomes in Chickens. Sci. Rep. 3, 1163; DOI:10.1038/srep01163 (2013).]
Body Weight Selection Affects Quantitative Genetic Correlated Responses in Gut Microbiota
[Meng H, Zhang Y, Zhao L, Zhao W, He C, et al.Body Weight Selection Affects Quantitative Genetic Correlated Responses in Gut Microbiota. PLoS ONE,2014, 9(3): e89862]
Changes in intestinal microflora in rats with acute respiratory distress syndrome
[Yan Li,et al. Changes in intestinal microflora in rats with acute.World J Gastroenterol,2014 May 21,20(19): 5849-5858]
四君子汤对脾虚大鼠肠道菌群多样性的影响
[孟良艳,陈秀琴,石达友,黄海定,郭世宁.四君子汤对脾虚大鼠肠道菌群多样性的影响.畜牧兽医学报,2013,44 (12): 2029-2035]
Analysis of the Gut Microbiota by High-Throughput Sequencing of the V5–V6 Regions of the 16S rRNA Gene in Donkey
[Xinfeng Liu,Hanlu Fan,Xiangbin Ding ,Zhongshan Hong ,Yongwei Nei ,Zhongwei Liu ,Guangpeng Li ,Hong Guo . Curr Microbiol ,2014, 68:657-662]
Analysis of horse genomes provides insight into the diversification and adaptive evolution of karyotype
[Huang, J.L. et al. Analysis of horse genomes provides insight into the diversification and adaptive evolution of karyotype. Sci. Rep. 4, 4958; DOI:10.1038/srep04958 (2014).]
Isolation and Characterization of Microsatellite Markers for Cotinus coggygria Scop. (Anacardiaceae) by 454 Pyrosequencing
[Wei Wang , Zhuo Li , and Yong Li . Isolation and Characterization of Microsatellite Markers for Cotinus coggygria Scop. (Anacardiaceae) by 454 Pyrosequencing. molecules ,2014, 19 : 3813-3819]
Genome sequences of wild and domestic bactrian camels
[H. Meng, et al., "Genome sequences of wild and domestic Bactrian camels," Nature Communications, doi: 10.1038/ncomms2192, 2012.]
Genetic diversity of Pleuronectes yokohamae population revealed by fluorescence microsatellite labeled
[Ting Pan, Yan Zhang, Tianxiang Gao and Fenghui Li (2014) Genetic diversity of Pleuronectes yokohamae population revealed by fluorescence microsatellite labeled.]
Transcriptome profiling of pyrethroid resistant and susceptible mosquitoes in the malaria vector, Anopheles sinensis
[Zhu G, Zhong D, Cao J, et al. Transcriptome profiling of pyrethroid resistant and susceptible mosquitoes in the malaria vector, Anopheles sinensis[J]. BMC genomics, 2014
Transcriptional Responses of Olive Flounder (Paralichthys olivaceus) to Low Temperature
[Hu J, You F, Wang Q, et al. Transcriptional Responses of Olive Flounder (Paralichthys olivaceus) to Low Temperature[J]. PloS one, 2014, 9(10): e108582.]
Growth Hormone-Regulated mRNAs and miRNAs in Chicken Hepatocytes
[Wang X, Yang L, Wang H, Shao F, Yu J, et al. (2014) Growth Hormone-Regulated mRNAs and miRNAs in Chicken Hepatocytes. PLoS ONE 9(11): e112896]
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